lag ) /storage/mi/marscher/software/miniconda3/conda-bld/pyemma-doc_1607519340854/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pl/lib/python3.9/site-packages/pyemma/msm/api.py in estimate_hidden_markov_model (dtrajs, nstates, lag, reversible, stationary, connectivity, mincount_connectivity, separate, observe_nonempty, stride, dt_traj, accuracy, maxit) 1210 accuracy=accuracy, maxit=maxit)ġ211 # run estimation -> 1212 return hmsm_estimator. ValueError Traceback (most recent call last) concatenate ( data ), bins = 30, alpha = 0.33 ) tx. set_title ( 'stationary distribution $\pi$' ) for ax in axes : tx = ax. set_title ( 'metastable distributions (md)' ) axes. subplots () for n, _traj in enumerate ( data ): ax.
Def plot_1D_histogram_trajectories ( data, cluster = None, max_traj_length = 200, ax = None ): if ax is None : fig, ax = plt.
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